Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP33227.1Uncharacterized protein conserved in bacteria. (334 aa)    
Predicted Functional Partners:
ACP33224.1
Hypothetical protein.
 
     0.789
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
 0.750
ACP33226.1
Hypothetical protein.
       0.720
glgX
Putative glycogen debranching enzyme; Type II secretory pathway pullulanase PulA and related glycosidases; Belongs to the glycosyl hydrolase 13 family.
       0.624
tetR
Transcriptional regulator, TetR family; Transcriptional regulator.
       0.610
ACP33225.1
Hypothetical protein.
       0.608
ACP31698.1
Hypothetical protein; Esterase/lipase.
  
     0.559
ACP31692.1
Hypothetical protein.
  
     0.556
rel
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
 0.540
ACP33111.1
Hypothetical protein; Restriction endonuclease.
  
     0.532
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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