STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33334.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
galK
Galactokinase.
 
     0.779
ACP32662.1
Putative membrane protein.
  
     0.746
ACP31872.1
Hypothetical protein.
  
     0.701
ACP33243.1
Putative secreted protein.
  
     0.605
ACP32091.1
Putative secreted protein.
  
     0.574
uspA2
Universal stress protein UspA and related nucleotide-binding proteins.
  
    0.514
ACP33112.1
Putative secreted protein.
  
     0.496
ACP32835.1
Hypothetical protein.
  
     0.486
lppL
Prolipoprotein LppL.
  
     0.461
ACP31744.1
Putative membrane protein; Vacuolar transporter chaperone.
 
     0.449
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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