Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptpALow molecular weight protein-tyrosine- phosphatase; Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (163 aa)    
Predicted Functional Partners:
ACP33711.1
Hypothetical protein; Fructosamine-3-kinase.
     0.818
ACP33341.1
Putative membrane protein.
 
     0.797
rnhA
Ribonuclease HI.
     
 0.692
ACP33338.1
Zn-ribbon protein, possibly nucleic acid- binding.
  
    0.682
ACP33339.1
Hypothetical protein.
       0.675
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
  
 0.508
scrB
Sucrose-6-phosphate hydrolase; Beta-fructosidases (levanase/invertase).
  
   0.434
ACP32593.1
Putative glycoside hydrolase; Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.
  
   0.434
arsT
Putative arsenic-transport protein; Arsenite efflux pump ACR3 and related permeases.
  
  
 0.433
cpsD
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.426
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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