STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33369.1Transcriptional regulator, deoR family; Transcriptional regulators of sugar metabolism. (299 aa)    
Predicted Functional Partners:
ptsF
Phosphotransferase system, fructose-specific IIC component.
 
  
 0.875
manP
Phosphotransferase system, fructose-specific IIC component.
 
  
 0.867
fruK
1-phosphofructokinase; Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
 
  
 0.831
ACP32474.1
Hypothetical protein; Acyl-CoA synthetase (NDP forming).
    
   0.607
ACP33370.1
Hypothetical protein.
       0.540
ptsS
PTS system, sucrose-specific IIBC component; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.451
ptsG
PTS system, glucose-specific IIABC component; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.428
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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