Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP33381.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
ACP31753.1
Hypothetical protein.
  
     0.595
wecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.588
ACP33453.1
Putative membrane protein.
  
     0.574
ACP31822.1
Putative membrane protein; Flp pilus assembly protein TadC.
  
     0.526
ACP33017.1
Putative membrane protein.
  
     0.454
ACP32580.1
Putative membrane protein.
  
     0.436
ACP31821.1
Putative membrane protein; Flp pilus assembly protein TadB.
  
     0.422
ACP33693.1
Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.420
ssb3
Single-stranded DNA-binding protein.
  
     0.414
ACP32128.1
Predicted membrane protein.
  
     0.409
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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