Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP33389.1Putative membrane protein. (685 aa)    
Predicted Functional Partners:
ACP33952.1
Hypothetical protein.
  
     0.627
ACP32091.1
Putative secreted protein.
 
 
   0.574
aftC
Arabinofuranosyl transferase C.
  
     0.550
ACP32325.1
Putative secreted protein.
 
   
 0.539
ACP33961.1
Putative carbohydrate esterase.
 
  
 0.516
embC
Arabinosyl transferase C.
 
 
 0.502
ACP32387.1
Glutaredoxin and related proteins.
  
     0.497
ACP33920.1
Putative secreted protein.
   
 
 0.491
ACP33923.1
Putative membrane protein.
   
 
 0.491
dciAE
ABC-type dipeptide transport system periplasmic component.
  
    0.483
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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