Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadD5Long-chain acyl-CoA synthetases (AMP-forming). (613 aa)    
Predicted Functional Partners:
fas-IB
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
 
 0.958
fas-IA
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 0.952
fadD3
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
0.930
fadD2
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
0.929
accBC1
Acetyl/propionyl-CoA carboxylase alpha subunit.
    
 0.812
accBC2
Acetyl/propionyl-CoA carboxylase alpha subunit.
    
 0.812
dts1
propionyl-CoA carboxylase beta chain; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
    
  0.804
dts2
propionyl-CoA carboxylase beta chain; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
    
  0.804
ppm1
Polyprenol-phosphate-mannose synthase domain 1.
  
   
 0.804
accD
acyl-CoA carboxylase, beta subunit; Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta).
    
  0.804
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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