STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brnQBranched-chain amino acid uptake carrier; Component of the transport system for branched-chain amino acids. (453 aa)    
Predicted Functional Partners:
ACP33417.1
Putative monooxygenase; Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase and related flavin- dependent oxidoreductases.
 
     0.862
metC
Cystathionine beta-lyase; Bifunctional PLP-dependent enzyme with beta- cystathionase and maltose regulon repressor activities.
       0.811
ywjA
ABC-type multidrug transport system ATPase and permease components.
       0.801
ACP33418.1
HTH-type transcriptional repressor; Transcriptional regulators.
       0.712
ACP33419.1
ABC-type dipeptide transport system, periplasmic component.
       0.664
ACP33413.1
Putative secreted protein.
       0.644
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.583
ACP33421.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
     
 0.551
oppB2
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
     
 0.549
ACP33423.1
Predicted membrane protein.
       0.544
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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