STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppB2ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (301 aa)    
Predicted Functional Partners:
ACP33419.1
ABC-type dipeptide transport system, periplasmic component.
 
 0.977
ACP33421.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.974
ACP33422.1
Nickel ABC transport system, ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
  
 0.936
dppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.889
ACP33634.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.888
oppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.880
oppD
Glutathione import ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
  
 0.800
ACP33423.1
Predicted membrane protein.
       0.794
ACP33633.1
ABC transport system, ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
  
 0.791
ACP33636.1
ABC-type dipeptide transport system, periplasmic component.
 
 
 0.788
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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