Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP32256.1 | manA | cauri_0659 | cauri_0670 | Mannose-1-phosphate guanyltransferase; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF- 2Bgamma/eIF-2Bepsilon). | Phosphomannose isomerase. | 0.573 |
ACP32256.1 | pmmA | cauri_0659 | cauri_0663 | Mannose-1-phosphate guanyltransferase; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF- 2Bgamma/eIF-2Bepsilon). | Phosphomannomutase. | 0.953 |
ACP32256.1 | pmmB | cauri_0659 | cauri_1880 | Mannose-1-phosphate guanyltransferase; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF- 2Bgamma/eIF-2Bepsilon). | Phosphomannomutase. | 0.949 |
ACP32266.1 | manA | cauri_0669 | cauri_0670 | Hypothetical protein. | Phosphomannose isomerase. | 0.913 |
ACP32266.1 | pmmA | cauri_0669 | cauri_0663 | Hypothetical protein. | Phosphomannomutase. | 0.404 |
ACP32266.1 | pmmB | cauri_0669 | cauri_1880 | Hypothetical protein. | Phosphomannomutase. | 0.865 |
ACP33477.1 | cdd | cauri_1884 | cauri_1883 | Nucleoside permease. | Cytidine deaminase. | 0.844 |
ACP33477.1 | deoA | cauri_1884 | cauri_1882 | Nucleoside permease. | Thymidine phosphorylase. | 0.803 |
ACP33477.1 | deoC2 | cauri_1884 | cauri_1881 | Nucleoside permease. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.706 |
ACP33477.1 | pmmB | cauri_1884 | cauri_1880 | Nucleoside permease. | Phosphomannomutase. | 0.645 |
cdd | ACP33477.1 | cauri_1883 | cauri_1884 | Cytidine deaminase. | Nucleoside permease. | 0.844 |
cdd | deoA | cauri_1883 | cauri_1882 | Cytidine deaminase. | Thymidine phosphorylase. | 0.995 |
cdd | deoC2 | cauri_1883 | cauri_1881 | Cytidine deaminase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.798 |
cdd | pmmB | cauri_1883 | cauri_1880 | Cytidine deaminase. | Phosphomannomutase. | 0.691 |
deoA | ACP33477.1 | cauri_1882 | cauri_1884 | Thymidine phosphorylase. | Nucleoside permease. | 0.803 |
deoA | cdd | cauri_1882 | cauri_1883 | Thymidine phosphorylase. | Cytidine deaminase. | 0.995 |
deoA | deoC2 | cauri_1882 | cauri_1881 | Thymidine phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.952 |
deoA | pmmB | cauri_1882 | cauri_1880 | Thymidine phosphorylase. | Phosphomannomutase. | 0.792 |
deoC2 | ACP33477.1 | cauri_1881 | cauri_1884 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Nucleoside permease. | 0.706 |
deoC2 | cdd | cauri_1881 | cauri_1883 | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Cytidine deaminase. | 0.798 |
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