Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP33499.1Putative phage tail. (358 aa)    
Predicted Functional Partners:
ACP33498.1
Hypothetical protein; Type V secretory pathway, adhesin AidA.
       0.757
ACP33497.1
Hypothetical protein; Ribonucleases G and E.
   
   0.611
ACP33495.1
Putative secreted protein.
       0.591
ACP33496.1
Hypothetical protein.
       0.591
ACP33500.1
Putative membrane protein.
       0.581
ACP33501.1
Putative membrane protein.
       0.581
ACP33502.1
Putative membrane protein.
       0.581
acm
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.581
ACP33494.1
Hypothetical protein.
       0.511
ACP33506.1
Phage-related protein.
       0.501
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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