Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP33559.1Hypothetical protein; Integrase; Belongs to the 'phage' integrase family. (394 aa)    
Predicted Functional Partners:
ACP33560.1
Hypothetical protein.
     
 0.762
ACP33525.1
Hypothetical protein.
      
 0.618
ACP33558.1
Hypothetical protein; Predicted transcriptional regulators.
      
 0.618
ACP33620.1
Hypothetical protein.
      
 0.618
ACP32274.1
Hypothetical protein; Predicted amidophosphoribosyltransferases.
   
    0.464
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.452
tyrA
Prephenate dehydrogenase.
  
    0.432
ACP33621.1
Putative phage-related integrase; Belongs to the 'phage' integrase family.
 
   
0.421
ACP32284.1
Hypothetical protein; Belongs to the SOS response-associated peptidase family.
   
    0.412
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.412
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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