Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACP33642.1 | ACP33643.1 | cauri_2049 | cauri_2050 | Hypothetical protein. | acyl-CoA thioester hydrolase; Predicted thioesterase. | 0.872 |
| ACP33642.1 | ACP33644.1 | cauri_2049 | cauri_2051 | Hypothetical protein. | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 0.745 |
| ACP33643.1 | ACP33642.1 | cauri_2050 | cauri_2049 | acyl-CoA thioester hydrolase; Predicted thioesterase. | Hypothetical protein. | 0.872 |
| ACP33643.1 | ACP33644.1 | cauri_2050 | cauri_2051 | acyl-CoA thioester hydrolase; Predicted thioesterase. | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 0.745 |
| ACP33644.1 | ACP33642.1 | cauri_2051 | cauri_2049 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | Hypothetical protein. | 0.745 |
| ACP33644.1 | ACP33643.1 | cauri_2051 | cauri_2050 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | acyl-CoA thioester hydrolase; Predicted thioesterase. | 0.745 |
| ACP33644.1 | fadD5 | cauri_2051 | cauri_1816 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | Long-chain acyl-CoA synthetases (AMP-forming). | 0.860 |
| ACP33644.1 | ppm1 | cauri_2051 | cauri_1276 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | Polyprenol-phosphate-mannose synthase domain 1. | 0.879 |
| ACP33644.1 | rplC | cauri_2051 | cauri_0389 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.741 |
| ACP33644.1 | rplM | cauri_2051 | cauri_0455 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.742 |
| ACP33644.1 | rplU | cauri_2051 | cauri_1866 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.745 |
| ACP33644.1 | rpsC | cauri_2051 | cauri_0395 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.742 |
| ACP33644.1 | rpsE | cauri_2051 | cauri_0431 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.761 |
| ACP33644.1 | rpsO | cauri_2051 | cauri_1521 | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.742 |
| fadD5 | ACP33644.1 | cauri_1816 | cauri_2051 | Long-chain acyl-CoA synthetases (AMP-forming). | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 0.860 |
| fadD5 | ppm1 | cauri_1816 | cauri_1276 | Long-chain acyl-CoA synthetases (AMP-forming). | Polyprenol-phosphate-mannose synthase domain 1. | 0.891 |
| ppm1 | ACP33644.1 | cauri_1276 | cauri_2051 | Polyprenol-phosphate-mannose synthase domain 1. | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 0.879 |
| ppm1 | fadD5 | cauri_1276 | cauri_1816 | Polyprenol-phosphate-mannose synthase domain 1. | Long-chain acyl-CoA synthetases (AMP-forming). | 0.891 |
| rplC | ACP33644.1 | cauri_0389 | cauri_2051 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Putative ABC transport system, ATP-binding protein; ATPase components of ABC transporters with duplicated ATPase domains. | 0.741 |
| rplC | rplM | cauri_0389 | cauri_0455 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
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