STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lppSPutative lipoprotein; Uncharacterized protein conserved in bacteria. (407 aa)    
Predicted Functional Partners:
ACP33751.1
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.715
ACP32692.1
Hypothetical protein.
  
     0.685
ACP34114.1
Hypothetical protein; Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
     0.619
ACP33273.1
Putative membrane protein.
  
     0.571
ACP34033.1
Putative membrane protein.
  
     0.564
ACP33342.1
Hypothetical protein.
  
     0.550
cwlM
Putative hydrolase; N-acetylmuramoyl-L-alanine amidase.
 
   
 0.543
mptA
Alpha mannopyranosyltransferase.
  
     0.534
ACP33020.1
Putative membrane protein.
  
     0.523
ACP32302.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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