STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33660.1Transposase and inactivated derivatives. (403 aa)    
Predicted Functional Partners:
ACP33565.1
Hypothetical protein; Negative regulator of beta-lactamase expression.
  
     0.622
ACP33659.1
Transposase and inactivated derivatives.
 
    
0.483
spaH
Surface-anchored fimbrial subunit; Predicted outer membrane protein.
  
     0.480
ACP33661.1
Hypothetical protein.
       0.447
irp6C
Iron ABC transport system, ATP-binding protein.
       0.442
irp6B
Iron ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.442
irp6A
Iron ABC transport system, solute-binding protein.
       0.442
srtD
Putative fimbrial associated sortase-like protein; Sortase (surface protein transpeptidase).
  
     0.413
ACP33658.1
Putative transposase.
 
   
0.403
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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