STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
irp6AIron ABC transport system, solute-binding protein. (406 aa)    
Predicted Functional Partners:
irp6C
Iron ABC transport system, ATP-binding protein.
 
 
 0.992
irp6B
Iron ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.989
hmuU
Iron ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.827
ACP33661.1
Hypothetical protein.
       0.799
hmuT
Iron ABC transport system, solute-binding protein.
  
  
 0.736
hmuV
Iron ABC transport system, ATP-binding protein.
 
  
 0.699
ACP33913.1
Putative ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.590
fhuA
Iron ABC transport system, ATP-binding protein; ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components.
 
 
 0.585
fecA
Iron ABC transport system, ATP-binding protein; ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components.
 
 
 0.584
fepB
ABC-type Fe3+-siderophore transport system permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   0.512
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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