STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppAExtracellular solute-binding protein; ABC-type dipeptide transport system, periplasmic component. (566 aa)    
Predicted Functional Partners:
oppB1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.971
oppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.946
oppD
Glutathione import ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.894
oppB2
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.570
ACP33635.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.552
dppB
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.549
ACP33421.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.517
ACP33634.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.508
dppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.499
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.