STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ramATranscriptional regulator, LuxR family; DNA-binding HTH domain-containing proteins. (279 aa)    
Predicted Functional Partners:
glxR
Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
   
 
 0.892
murA
UDP-N-acetylglucosamine 1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.823
ACP34021.1
Hypothetical protein.
  
     0.751
ACP32278.1
Hypothetical protein; Predicted hydrolase (HAD superfamily).
  
     0.647
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.639
ACP32405.1
Putative membrane protein.
  
     0.634
cysE
Serine acetyltransferase.
       0.547
uspA2
Universal stress protein UspA and related nucleotide-binding proteins.
  
    0.534
ACP32662.1
Putative membrane protein.
  
     0.532
ramB
Putative transcriptional regulator, MerR family; Predicted transcriptional regulator.
   
 
 0.528
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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