Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ramATranscriptional regulator, LuxR family; DNA-binding HTH domain-containing proteins. (279 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.813
glxR
Transcriptional regulator, Crp family; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
   
 
 0.785
ACP34021.1
Hypothetical protein.
  
     0.751
ACP32278.1
Hypothetical protein; Predicted hydrolase (HAD superfamily).
  
     0.647
ACP32405.1
Putative membrane protein.
  
     0.634
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.609
uspA2
Universal stress protein UspA and related nucleotide-binding proteins.
  
    0.536
ACP32662.1
Putative membrane protein.
  
     0.532
cysE
Serine acetyltransferase.
       0.517
ACP32935.1
Putative membrane protein.
  
     0.488
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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