STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tcsS1Two-component system sensor kinase; Signal transduction histidine kinase. (483 aa)    
Predicted Functional Partners:
tcsR1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.966
mprA
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.880
mtrA
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.860
tcsR5
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.848
ACP33785.1
Transcriptional regulator, MerR family; Predicted transcriptional regulators.
     
 0.637
ACP32424.1
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain.
 
  
 0.466
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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