STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33800.1Feruloyl esterase B; Poly(3-hydroxybutyrate) depolymerase. (279 aa)    
Predicted Functional Partners:
ACP33797.1
Putative ABC transporter, solute-binding protein; ABC-type metal ion transport system, periplasmic component/surface adhesin.
       0.837
ACP33798.1
Putative ABC transport system, ATP-binding protein; ABC-type Mn/Zn transport systems ATPase component.
       0.837
ACP33799.1
ABC-type Mn2+/Zn2+ transport systems permease components.
       0.837
ACP33796.1
Transcriptional regulator, LacI family; Transcriptional regulators.
       0.697
ACP33119.1
Hypothetical protein.
  
     0.476
ACP32239.1
Flavin-binding monooxygenase-like protein; Predicted flavoprotein involved in K+ transport.
  
     0.447
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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