STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcaBeta-type carbonic anhydrase-like protein; Carbonic anhydrase. (207 aa)    
Predicted Functional Partners:
gca
Gamma-type carbonic anhydratase-like protein; Carbonic anhydrase.
    
 
 0.952
ACP31677.1
Putative phosphoglycolate phosphatase; Predicted hydrolase (HAD superfamily).
      
 0.854
mutY
A/G-specific DNA glycosylase.
     
 0.798
ACP32024.1
Putative transporter protein; Formate/nitrite family of transporters.
  
    0.747
ACP33850.1
Putative peptide synthase.
  
 
 0.743
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.735
ACP33810.1
Putative membrane protein.
       0.679
ACP31674.1
Sulfate permease and related transporters (MFS superfamily).
 
  
 0.518
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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