STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33842.1Putative membrane protein. (466 aa)    
Predicted Functional Partners:
ACP33843.1
ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
 0.891
ACP33841.1
Putative nisin-resistance protein; Periplasmic protease.
       0.844
ACP33844.1
Two-component system sensor kinase; Signal transduction histidine kinase.
 
    0.797
nreC3
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.784
spaH
Surface-anchored fimbrial subunit; Predicted outer membrane protein.
  
     0.472
ACP32739.1
Putative membrane protein.
  
     0.428
srtD
Putative fimbrial associated sortase-like protein; Sortase (surface protein transpeptidase).
  
     0.416
ACP31711.1
Hypothetical protein; Acetyltransferases, including N-acetylases of ribosomal proteins.
  
     0.405
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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