STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP33843.1ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components. (238 aa)    
Predicted Functional Partners:
yknZ
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.952
ACP33842.1
Putative membrane protein.
 
  
 0.895
ACP33841.1
Putative nisin-resistance protein; Periplasmic protease.
     
 0.805
ACP34044.1
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.632
molB
ABC-type sugar transport systems, ATPase components.
 
  
 0.618
ACP33844.1
Two-component system sensor kinase; Signal transduction histidine kinase.
  
    0.608
nreC3
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.599
gcp
Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.536
ACP32401.1
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.526
pheS
Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
   0.502
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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