STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33855.1Metal-nicotianamine transporter; Predicted membrane protein. (657 aa)    
Predicted Functional Partners:
tpdA
Thiol precursor dipeptidase; Acetylornithine deacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases.
  
    0.703
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
   
 0.600
groEL2
Molecular chaperone protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.589
ACP32972.1
Putative secreted protein; ABC-type amino acid transport/signal transduction systems periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
      
 0.540
metK1
S-adenosylmethionine synthetase.
  
     0.478
ACP32950.1
Predicted membrane protein.
  
     0.428
ACP32410.1
Putative secreted protein.
  
     0.419
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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