Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP33864.1 | ACP33865.1 | cauri_2273 | cauri_2274 | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Putative membrane protein. | 0.746 |
ACP33864.1 | ACP33866.1 | cauri_2273 | cauri_2275 | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Hypothetical protein. | 0.691 |
ACP33864.1 | ACP33868.1 | cauri_2273 | cauri_2277 | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Hypothetical protein. | 0.609 |
ACP33864.1 | cls | cauri_2273 | cauri_2279 | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes. | 0.609 |
ACP33864.1 | defA | cauri_2273 | cauri_2276 | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.609 |
ACP33864.1 | xthA | cauri_2273 | cauri_2278 | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Exonuclease III. | 0.609 |
ACP33865.1 | ACP33864.1 | cauri_2274 | cauri_2273 | Putative membrane protein. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.746 |
ACP33865.1 | ACP33866.1 | cauri_2274 | cauri_2275 | Putative membrane protein. | Hypothetical protein. | 0.777 |
ACP33865.1 | ACP33868.1 | cauri_2274 | cauri_2277 | Putative membrane protein. | Hypothetical protein. | 0.664 |
ACP33865.1 | cls | cauri_2274 | cauri_2279 | Putative membrane protein. | Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes. | 0.664 |
ACP33865.1 | defA | cauri_2274 | cauri_2276 | Putative membrane protein. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.664 |
ACP33865.1 | xthA | cauri_2274 | cauri_2278 | Putative membrane protein. | Exonuclease III. | 0.664 |
ACP33866.1 | ACP33864.1 | cauri_2275 | cauri_2273 | Hypothetical protein. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.691 |
ACP33866.1 | ACP33865.1 | cauri_2275 | cauri_2274 | Hypothetical protein. | Putative membrane protein. | 0.777 |
ACP33866.1 | ACP33868.1 | cauri_2275 | cauri_2277 | Hypothetical protein. | Hypothetical protein. | 0.714 |
ACP33866.1 | cls | cauri_2275 | cauri_2279 | Hypothetical protein. | Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes. | 0.714 |
ACP33866.1 | defA | cauri_2275 | cauri_2276 | Hypothetical protein. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.714 |
ACP33866.1 | xthA | cauri_2275 | cauri_2278 | Hypothetical protein. | Exonuclease III. | 0.714 |
ACP33868.1 | ACP33864.1 | cauri_2277 | cauri_2273 | Hypothetical protein. | Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.609 |
ACP33868.1 | ACP33865.1 | cauri_2277 | cauri_2274 | Hypothetical protein. | Putative membrane protein. | 0.664 |
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