defA protein (Corynebacterium aurimucosum) - STRING interaction network

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defA

Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (210 aa)

Predicted Functional Partners:

xthA

0.901

ACP33868.1

0.892

cls

0.834

tig

0.813

rplU

0.803

rplX

0.797

rpsP

0.781

rplT

0.779

rplI

0.779

rpsT

0.770

Your Current Organism:

Corynebacterium aurimucosum

NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP33868.1	cls	cauri_2277	cauri_2279	Hypothetical protein.	Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes.	0.834
ACP33868.1	defA	cauri_2277	cauri_2276	Hypothetical protein.	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.892
ACP33868.1	xthA	cauri_2277	cauri_2278	Hypothetical protein.	Exonuclease III.	0.883
cls	ACP33868.1	cauri_2279	cauri_2277	Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes.	Hypothetical protein.	0.834
cls	defA	cauri_2279	cauri_2276	Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes.	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.834
cls	xthA	cauri_2279	cauri_2278	Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes.	Exonuclease III.	0.834
defA	ACP33868.1	cauri_2276	cauri_2277	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Hypothetical protein.	0.892
defA	cls	cauri_2276	cauri_2279	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes.	0.834
defA	rplI	cauri_2276	cauri_2438	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.779
defA	rplT	cauri_2276	cauri_1358	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.779
defA	rplU	cauri_2276	cauri_1866	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.803
defA	rplX	cauri_2276	cauri_0423	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.797
defA	rpsP	cauri_2276	cauri_1587	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.781
defA	rpsT	cauri_2276	cauri_1844	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.770
defA	tig	cauri_2276	cauri_1897	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.	0.813
defA	xthA	cauri_2276	cauri_2278	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Exonuclease III.	0.901
rplI	defA	cauri_2438	cauri_2276	50S ribosomal protein L9; Binds to the 23S rRNA.	Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.779
rplI	rplT	cauri_2438	cauri_1358	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.996
rplI	rplU	cauri_2438	cauri_1866	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplI	rplX	cauri_2438	cauri_0423	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.986

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