STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33872.1Putative ABC transport system, permease protein. (254 aa)    
Predicted Functional Partners:
ACP33873.1
Putative ABC transport system, ATP-binding protein; ABC-type multidrug transport system ATPase component.
 
     0.934
bcr
Bicyclomycin, sulfonamide resistance protein; Permeases of the major facilitator superfamily.
       0.844
ACP33874.1
Putative 7,8-dihydro-8-oxoguanine- triphosphatase; NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
 
     0.799
glnX
Putative membrane protein.
 
     0.717
ACP33665.1
Putative membrane protein.
  
     0.687
lppL
Prolipoprotein LppL.
 
    0.686
ACP32988.1
Hypothetical protein.
  
 
 
 0.680
pknG
Serine/threonine protein kinase.
  
    0.653
glnH
Putative extracellular solute-binding protein; ABC-type amino acid transport/signal transduction systems periplasmic component/domain.
       0.647
ACP34004.1
Hypothetical protein.
  
     0.610
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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