STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ACP33873.1Putative ABC transport system, ATP-binding protein; ABC-type multidrug transport system ATPase component. (312 aa)    
Predicted Functional Partners:
ACP33872.1
Putative ABC transport system, permease protein.
 
     0.930
bcr
Bicyclomycin, sulfonamide resistance protein; Permeases of the major facilitator superfamily.
       0.834
ACP33874.1
Putative 7,8-dihydro-8-oxoguanine- triphosphatase; NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
       0.747
pknG
Serine/threonine protein kinase.
  
    0.632
glnX
Putative membrane protein.
       0.624
glnH
Putative extracellular solute-binding protein; ABC-type amino acid transport/signal transduction systems periplasmic component/domain.
       0.624
tetA
ABC-type multidrug transport system ATPase and permease components.
  
  0.457
bioM
Putative ABC transport system, ATP-binding protein; ABC-type cobalt transport system ATPase component.
 
   
0.456
atpC
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.430
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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