STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33889.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
iscS
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 0.828
nifU
NifU homolog involved in Fe-S cluster formation.
  
 0.798
fpr
Putative ferredoxin/ferredoxin-NADP reductase; NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.788
trmFO
methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.788
ACP32707.1
Hypothetical protein.
    
 
 0.628
ACP32472.1
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 
 0.584
fabG1
Short-chain alcohol dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 
 0.584
fabG2
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 
 0.584
ACP32744.1
Zinc finger protein 768.
    
   0.579
pks13
Polyketide synthase modules and related proteins.
   
 
 0.573
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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