Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yflSDi- and tricarboxylate transporters. (499 aa)    
Predicted Functional Partners:
ttdB
Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
 
   
 0.936
ttdA
Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain.
 
   
 0.915
nagE
PTS system, N-acetylglucosamine-specific IIABC component; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
   
  
 0.655
ACP33890.1
Predicted membrane protein.
       0.634
manP
Phosphotransferase system, fructose-specific IIC component.
   
  
 0.626
gntP
H+/gluconate symporter and related permeases.
      
 0.618
lldT
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
      
 0.618
glpF
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.607
ACP33894.1
HTH-type transcriptional regulator; AraC-type DNA-binding domain-containing proteins.
 
   
 0.523
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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