STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33907.1Hypothetical protein; AraC-type DNA-binding domain-containing proteins. (383 aa)    
Predicted Functional Partners:
ACP33906.1
Hypothetical protein.
       0.781
ACP33905.1
Hypothetical protein; Predicted amidohydrolase.
  
    0.697
ACP31698.1
Hypothetical protein; Esterase/lipase.
  
     0.686
ACP34124.1
Hypothetical protein.
  
     0.678
ACP33868.1
Hypothetical protein.
  
     0.666
dnaQ1
DNA polymerase III epsilon subunit and related 3-5 exonucleases.
  
     0.651
ACP32875.1
Putative membrane protein.
  
     0.594
ACP32867.1
Putative membrane protein; Protein affecting phage T7 exclusion by the F plasmid.
  
     0.554
ACP32401.1
ABC-type antimicrobial peptide transport system, permease component.
  
     0.535
ACP32010.1
Putative membrane protein.
  
     0.525
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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