Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
novA1Lipid A export ATP-binding/permease protein; ABC-type multidrug transport system, ATPase and permease components. (572 aa)    
Predicted Functional Partners:
ACP33929.1
ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.995
gluA
Glutamate ABC transport system, ATP-binding protein; ABC-type polar amino acid transport system ATPase component.
 
     
0.873
novA2
Lipid A export ATP-binding/permease protein; ABC-type multidrug transport system, ATPase and permease components.
 
 
  
0.797
ACP32870.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
     
0.784
ywjA
ABC-type multidrug transport system ATPase and permease components.
 
 
  
0.782
ACP32382.1
ABC-type multidrug transport system ATPase and permease components.
   
   0.746
sigE2
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
      
 0.744
ACP32048.1
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
      
 0.736
pks13
Polyketide synthase modules and related proteins.
  
 
 0.552
ACP33932.1
Putative membrane protein.
       0.536
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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