STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
novA1Lipid A export ATP-binding/permease protein; ABC-type multidrug transport system, ATPase and permease components. (572 aa)    
Predicted Functional Partners:
gluA
Glutamate ABC transport system, ATP-binding protein; ABC-type polar amino acid transport system ATPase component.
 
     
0.873
ACP33929.1
ABC-type multidrug transport system, ATPase and permease components.
 
    
0.845
ACP32870.1
ABC transport system, ATP-binding protein; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
     
0.784
alaT
Aspartate/tyrosine/aromatic aminotransferase.
  
    0.569
ACP33932.1
Putative membrane protein.
       0.566
pks13
Polyketide synthase modules and related proteins.
  
 
 0.543
ACP33930.1
Fe-S oxidoreductases.
       0.513
cysH
Adenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
  
    0.474
trmFO
methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
       0.468
ACP33148.1
Putative ABC transport system, ATP-binding protein; ABC-type multidrug transport system ATPase component.
  
  0.457
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.