Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP33945.1Putative membrane protein. (395 aa)    
Predicted Functional Partners:
ACP33947.1
Putative membrane protein.
 
   
 0.908
ACP33946.1
Putative membrane protein.
 
   
 0.873
ACP33949.1
SAM-dependent methyltransferases.
 
   
 0.688
ACP33181.1
Putative membrane protein; Predicted acyltransferases.
  
     0.681
ACP33961.1
Putative carbohydrate esterase.
 
  
 0.623
pks13
Polyketide synthase modules and related proteins.
 
   
 0.612
ACP33944.1
Putative membrane protein.
 
   
 0.593
ACP32325.1
Putative secreted protein.
  
     0.558
aftC
Arabinofuranosyl transferase C.
  
     0.556
ACP31966.1
Putative membrane protein.
 
   
 0.517
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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