STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP33952.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
trmB
Putative tRNA -methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.947
ACP33954.1
Putative membrane protein.
 
   
 0.946
ACP33955.1
Putative membrane protein.
 
   
 0.879
mmpL1
Predicted drug exporters of the RND superfamily.
 
  
 0.877
cobG
Cobalamin biosynthesis protein; Sulfite reductase, beta subunit (hemoprotein).
  
     0.764
aftC
Arabinofuranosyl transferase C.
  
     0.761
ACP33965.1
Putative membrane protein.
  
     0.751
aftA
Arabinofuranosyl transferase A.
 
     0.748
ACP33961.1
Putative carbohydrate esterase.
  
   
 0.741
embC
Arabinosyl transferase C.
  
     0.728
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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