STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pks13Polyketide synthase modules and related proteins. (1593 aa)    
Predicted Functional Partners:
ACP31876.1
3-oxoacyl-(acyl-carrier-protein) synthase.
 
 0.999
fas-IB
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 0.999
fas-IA
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 0.999
fadD6
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 0.999
ACP31646.1
Putative peptide synthase.
 0.997
ACP31649.1
Acetyltransferase (isoleucine patch superfamily).
  
 0.996
pptA
Putative 4-phosphopantetheinyl transferase; Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
 
 
 0.995
accD
acyl-CoA carboxylase, beta subunit; Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta).
  
 
 0.993
ACP33850.1
Putative peptide synthase.
 0.990
cmtB
Trehalose corynomycolyl transferase B; Predicted esterase.
 
 
 0.982
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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