STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmtCTrehalose corynomycolyl transferase C; Predicted esterase. (664 aa)    
Predicted Functional Partners:
pks13
Polyketide synthase modules and related proteins.
 
  
 0.967
ACP33961.1
Putative carbohydrate esterase.
 
  
 0.947
ACP33962.1
Putative secreted protein.
     
 0.874
ACP33965.1
Putative membrane protein.
 
   
 0.853
fadD6
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  
 0.830
ACP33243.1
Putative secreted protein.
  
     0.766
cmtB
Trehalose corynomycolyl transferase B; Predicted esterase.
 
   
0.764
ACP31872.1
Hypothetical protein.
  
     0.750
aftC
Arabinofuranosyl transferase C.
  
     0.741
ACP32536.1
Uncharacterized membrane protein, required for N-linked glycosylation.
  
     0.732
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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