STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP34033.1Putative membrane protein. (467 aa)    
Predicted Functional Partners:
ACP34035.1
Hypothetical protein.
 
     0.858
ACP34032.1
Putative membrane protein.
       0.844
pbp1A
Membrane carboxypeptidase (penicillin-binding protein).
  
    0.834
ACP32692.1
Hypothetical protein.
  
     0.692
ACP31822.1
Putative membrane protein; Flp pilus assembly protein TadC.
  
     0.687
mptA
Alpha mannopyranosyltransferase.
  
     0.685
ACP32702.1
Hypothetical protein.
  
     0.676
ACP32335.1
Putative ThiJ/PfpI family protein; Putative intracellular protease/amidase.
  
    0.668
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.654
ssb1
Single-stranded DNA-binding protein.
       0.598
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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