STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP34043.1ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components. (216 aa)    
Predicted Functional Partners:
ACP34044.1
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.995
yknZ
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.957
ACP33270.1
ABC-type antimicrobial peptide transport system permease component.
 
 0.723
ACP34042.1
Predicted integral membrane protein.
       0.650
chrS
Signal transduction histidine kinase.
  
    0.596
chrA
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.585
ACP34047.1
Putative oxidoreductase; Predicted flavoprotein involved in K+ transport.
       0.582
ACP32401.1
ABC-type antimicrobial peptide transport system, permease component.
  
   0.553
cysS
Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.546
gcp
Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.541
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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