STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP34044.1Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component. (331 aa)    
Predicted Functional Partners:
ACP34043.1
ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.996
ACP33271.1
Putative ABC transport system, ATP-binding protein; ABC-type antimicrobial peptide transport system ATPase component.
 
 0.979
ACP33270.1
ABC-type antimicrobial peptide transport system permease component.
 
 
0.929
chrS
Signal transduction histidine kinase.
 
     0.765
chrA
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.721
ACP34042.1
Predicted integral membrane protein.
       0.718
ACP31917.1
Methionine import ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
  
 
 0.632
ACP32402.1
Methionine import ATP-binding protein; ABC-type sugar transport systems, ATPase components.
  
 
 0.632
ACP33720.1
Putative ABC transport system, ATP-binding protein; ABC-type antimicrobial peptide transport system ATPase component.
  
 
 0.632
ACP33843.1
ABC transport system, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
  
 
 0.632
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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