Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP34117.1Uncharacterized membrane protein putative virulence factor. (1080 aa)    
Predicted Functional Partners:
ACP34116.1
Putative membrane protein.
 
     0.946
holA
DNA polymerase III delta subunit.
  
  
 0.760
ACP31603.1
Hypothetical protein; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives.
      
 0.744
ACP34005.1
Hypothetical protein.
  
     0.693
ACP32716.1
Putative membrane protein.
  
     0.681
ACP32722.1
Putative membrane protein.
  
     0.672
aftA
Arabinofuranosyl transferase A.
  
     0.649
ACP32045.1
Putative membrane protein.
  
     0.648
ACP31945.1
Putative secreted protein.
  
     0.645
ACP33688.1
Putative membrane protein; Glucitol operon activator.
  
   
 0.645
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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