STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwlMPutative hydrolase; N-acetylmuramoyl-L-alanine amidase. (394 aa)    
Predicted Functional Partners:
ACP33287.1
Putative secreted protein; Cell wall-associated hydrolases (invasion- associated proteins).
  
  
 0.816
murA
UDP-N-acetylglucosamine 1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.784
trxC
Thioredoxin; Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
   
   0.752
trxB
Thioredoxin reductase.
  
    0.725
csm
Chorismate mutase.
  
     0.706
ACP33281.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.706
ACP32831.1
Cell wall-associated hydrolases (invasion- associated proteins).
 
  
 0.682
ACP32131.1
Hypothetical protein.
  
     0.673
ACP33974.1
Putative secreted protein; Uncharacterized protein potentially involved in peptidoglycan biosynthesis.
   
  
 0.671
ACP31622.1
Rhomboid protease glpG; Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
   0.669
Your Current Organism:
Corynebacterium aurimucosum
NCBI taxonomy Id: 548476
Other names: C. aurimucosum ATCC 700975, Corynebacterium aurimucosum ATCC 700975, Corynebacterium aurimucosum CCUG 48176, Corynebacterium aurimucosum CIP 107436, Corynebacterium aurimucosum CN-1, Corynebacterium aurimucosum DSM 44827, Corynebacterium aurimucosum str. ATCC 700975, Corynebacterium aurimucosum strain ATCC 700975, Corynebacterium nigricans CN-1
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