STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI66385.1Relaxase/mobilization nuclease domain protein; Pfam: PF03432; InterPro: IPR005094. (486 aa)    
Predicted Functional Partners:
ADI66389.1
TraG/TraD family protein; Pfam: PF02534; InterPro: IPR003688.
 
   
 0.949
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.871
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
   
 
  0.859
ADI66393.1
Hypothetical protein.
 
   
 0.814
ADI66390.1
Hypothetical protein.
 
     0.803
ADI66386.1
Hypothetical protein.
       0.802
ADI67530.1
DNA-binding helix-turn-helix protein; Pfam: PF01381; InterPro: IPR001387.
  
    0.728
ADI66387.1
Hypothetical protein.
       0.704
ADI66388.1
Hypothetical protein.
       0.704
ADI67532.1
Putative translation elongation factor G; COG: COG0480; Pfam: PF00009,PF03144,PF03764,PF00679; InterPro: IPR000795.
  
  
 0.644
Your Current Organism:
Mobiluncus curtisii
NCBI taxonomy Id: 548479
Other names: Falcivibrio vaginalis ATCC 43063, M. curtisii ATCC 43063, Mobiluncus curtisii ATCC 43063, Mobiluncus curtisii str. ATCC 43063, Mobiluncus curtisii strain ATCC 43063
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