Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADI66368.1 | ADI66438.1 | HMPREF0573_10049 | HMPREF0573_10119 | Hypothetical protein. | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | 0.410 |
ADI66368.1 | ADI66439.1 | HMPREF0573_10049 | HMPREF0573_10120 | Hypothetical protein. | PspC domain protein; Pfam: PF04024,PF02518. | 0.533 |
ADI66368.1 | ADI66899.1 | HMPREF0573_10049 | HMPREF0573_10580 | Hypothetical protein. | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | 0.480 |
ADI66368.1 | ADI67155.1 | HMPREF0573_10049 | HMPREF0573_10836 | Hypothetical protein. | Hypothetical protein. | 0.602 |
ADI66438.1 | ADI66368.1 | HMPREF0573_10119 | HMPREF0573_10049 | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Hypothetical protein. | 0.410 |
ADI66438.1 | ADI66439.1 | HMPREF0573_10119 | HMPREF0573_10120 | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | PspC domain protein; Pfam: PF04024,PF02518. | 0.960 |
ADI66438.1 | ADI67154.1 | HMPREF0573_10119 | HMPREF0573_10835 | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072; InterPro: IPR001789. | 0.706 |
ADI66438.1 | ADI67155.1 | HMPREF0573_10119 | HMPREF0573_10836 | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Hypothetical protein. | 0.470 |
ADI66438.1 | ADI67249.1 | HMPREF0573_10119 | HMPREF0573_10930 | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Histidine kinase; Pfam: PF07730,PF02518; InterPro: IPR003594. | 0.848 |
ADI66439.1 | ADI66368.1 | HMPREF0573_10120 | HMPREF0573_10049 | PspC domain protein; Pfam: PF04024,PF02518. | Hypothetical protein. | 0.533 |
ADI66439.1 | ADI66438.1 | HMPREF0573_10120 | HMPREF0573_10119 | PspC domain protein; Pfam: PF04024,PF02518. | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | 0.960 |
ADI66439.1 | ADI66899.1 | HMPREF0573_10120 | HMPREF0573_10580 | PspC domain protein; Pfam: PF04024,PF02518. | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | 0.550 |
ADI66439.1 | ADI67155.1 | HMPREF0573_10120 | HMPREF0573_10836 | PspC domain protein; Pfam: PF04024,PF02518. | Hypothetical protein. | 0.553 |
ADI66439.1 | ADI67249.1 | HMPREF0573_10120 | HMPREF0573_10930 | PspC domain protein; Pfam: PF04024,PF02518. | Histidine kinase; Pfam: PF07730,PF02518; InterPro: IPR003594. | 0.628 |
ADI66899.1 | ADI66368.1 | HMPREF0573_10580 | HMPREF0573_10049 | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Hypothetical protein. | 0.480 |
ADI66899.1 | ADI66439.1 | HMPREF0573_10580 | HMPREF0573_10120 | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | PspC domain protein; Pfam: PF04024,PF02518. | 0.550 |
ADI66899.1 | ADI67155.1 | HMPREF0573_10580 | HMPREF0573_10836 | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Hypothetical protein. | 0.504 |
ADI66899.1 | ADI67249.1 | HMPREF0573_10580 | HMPREF0573_10930 | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | Histidine kinase; Pfam: PF07730,PF02518; InterPro: IPR003594. | 0.852 |
ADI67154.1 | ADI66438.1 | HMPREF0573_10835 | HMPREF0573_10119 | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072; InterPro: IPR001789. | Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR001789. | 0.706 |
ADI67154.1 | ADI67155.1 | HMPREF0573_10835 | HMPREF0573_10836 | Response regulator receiver domain protein; COG: COG2197; Pfam: PF00072; InterPro: IPR001789. | Hypothetical protein. | 0.444 |
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