STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI67956.1ABC transporter, permease protein; Pfam: PF00528. (567 aa)    
Predicted Functional Partners:
ADI67955.1
ABC transporter, substrate-binding protein, thiB family; COG: COG4143; Pfam: PF01547; InterPro: IPR005948.
 
 
 0.994
ADI67957.1
ABC transporter, ATP-binding protein; COG: COG3839; Pfam: PF00005; InterPro: IPR003593.
 
 0.987
ADI67777.1
ABC transporter, ATP-binding protein; Pfam: PF00005,PF03459; InterPro: IPR003593; Belongs to the ABC transporter superfamily.
 
  
 0.576
ADI66649.1
ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
   
  
 0.507
ADI67273.1
VanW-like protein; COG: COG2720; Pfam: PF04294; InterPro: IPR007391.
  
     0.476
ADI66650.1
Periplasmic binding protein; Pfam: PF01497.
   
    0.453
ADI67958.1
RraA family; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
       0.413
glnA
Glutamine synthetase, type I; COG: COG0174; Pfam: PF03951,PF00120; InterPro: IPR004809.
       0.409
ADI67423.1
Hypothetical protein.
  
     0.406
ADI66832.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Mobiluncus curtisii
NCBI taxonomy Id: 548479
Other names: Falcivibrio vaginalis ATCC 43063, M. curtisii ATCC 43063, Mobiluncus curtisii ATCC 43063, Mobiluncus curtisii str. ATCC 43063, Mobiluncus curtisii strain ATCC 43063
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