Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL16_154S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (214 aa)    
Predicted Functional Partners:
MRPS18
37S ribosomal protein S18, mitochondrial.
  
 
 0.983
RML2_1
54S ribosomal protein RML2, mitochondrial.
 
 0.982
MRPL17
54S ribosomal protein L17, mitochondrial.
   
 0.982
RML2_0
54S ribosomal protein RML2, mitochondrial.
 
 0.982
MRP2_1
37S ribosomal protein MRP2, mitochondrial.
  
 
 0.980
IMG1
54S ribosomal protein IMG1, mitochondrial.
   
 0.979
MRPS16
37S ribosomal protein S16, mitochondrial.
   
 
 0.976
YML6
54S ribosomal protein YmL6, mitochondrial.
  
 0.972
MRPL38
54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family.
  
 0.970
MRPS28_1
37S ribosomal protein S28, mitochondrial.
   
 
 0.969
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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