STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cantr_04434Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
SEC16
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.944
SEC22_1
Protein transport protein SEC22; Belongs to the synaptobrevin family.
   
 0.940
SFB3_1
SED5-binding protein 3.
   
 0.918
SFB3_0
SED5-binding protein 3.
   
 0.918
SEC24_0
Protein transport protein SEC24.
   
 0.916
SEC24_1
Protein transport protein SEC24.
   
 0.916
SEC13_1
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.893
SEC13_0
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.893
SEC31_0
Protein transport protein SEC31.
   
 0.822
SEC31_1
Protein transport protein SEC31.
   
 0.822
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.