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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPT7_1GTP-binding protein YPT7. (216 aa)    
Predicted Functional Partners:
PEP5
E3 ubiquitin-protein ligase PEP5.
    
 
 0.966
ATG15
Putative lipase ATG15.
    
 
 0.949
Rab7a
Ras-related protein Rab-7a.
  
  
 
0.917
ypt71
GTP-binding protein ypt71.
  
  
 
0.917
nudA
Dynein heavy chain, cytoplasmic.
    
  0.914
ro-1
Dynein heavy chain, cytoplasmic.
    
  0.914
TUB1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.910
Cantr_06696
Uncharacterized protein.
    
 0.901
vam6_1
Vacuolar morphogenesis protein 6.
    
 
 0.880
vam6_0
Vacuolar morphogenesis protein 6.
    
 
 0.880
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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