STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPC1_1Mitochondrial thiamine pyrophosphate carrier 1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (299 aa)    
Predicted Functional Partners:
RPL14B_1
60S ribosomal protein L14-B.
   
 
 0.672
RPL14B_0
60S ribosomal protein L14-B.
   
 
 0.672
RPL27_0
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.660
RPL27_1
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.660
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.627
RPS8B_1
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.602
RPS3_0
40S ribosomal protein S3.
   
   0.602
RPL15B_0
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.599
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.597
RPL21A_0
60S ribosomal protein L21-A.
   
   0.597
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.