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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF8_1Transcription initiation factor TFIID subunit 8. (475 aa)    
Predicted Functional Partners:
TAF13
Transcription initiation factor TFIID subunit 13.
    
 0.995
taf11_1
Transcription initiation factor TFIID subunit 11.
    
 0.990
TAF6_1
Transcription initiation factor TFIID subunit 6.
    
 0.990
TAF6_0
Transcription initiation factor TFIID subunit 6.
    
 0.990
taf11_0
Transcription initiation factor TFIID subunit 11.
    
 0.990
TAF1
Transcription initiation factor TFIID subunit 1.
    
 0.986
TAF5_0
Transcription initiation factor TFIID subunit 5.
    
 0.985
TAF5_1
Transcription initiation factor TFIID subunit 5.
    
 0.985
TAF9_0
Transcription initiation factor TFIID subunit 9.
   
 0.984
TAF9_1
Transcription initiation factor TFIID subunit 9.
   
 0.984
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.