STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesB_5Acyl-CoA thioesterase 2. (279 aa)    
Predicted Functional Partners:
POX18_1
Oleate-induced peroxisomal protein POX18.
   
 
 0.677
POX18_0
Oleate-induced peroxisomal protein POX18.
   
 
 0.677
PEX5
Peroxisomal targeting signal receptor.
    
 0.641
PEX13
Peroxisomal membrane protein PEX13.
   
 
 0.525
PEX10
Peroxisome biogenesis factor 10.
     
 0.515
ubi3
Ubiquitin-40S ribosomal protein S27a.
     
 0.491
Cantr_06828
Uncharacterized protein.
   
 
 0.485
TMC1_1
AN1-type zinc finger protein TMC1.
    
  0.477
TMC1_0
AN1-type zinc finger protein TMC1.
    
  0.477
ECI1_2
3,2-trans-enoyl-CoA isomerase.
   
 
 0.473
Your Current Organism:
Candida viswanathii
NCBI taxonomy Id: 5486
Other names: ATCC 22981, C. viswanathii, CBS 4024, CCRC 21330, CCRC:21330, Candida lodderae, Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa, 2015, DBVPG 6189, IFO 10321, JCM 9567, NRRL Y-6660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.